java.lang.Object
- picard.arrays.illumina.IlluminaManifestRecord
- - picard.arrays.illumina.Build37ExtendedIlluminaManifestRecord

```
public class Build37ExtendedIlluminaManifestRecord
extends IlluminaManifestRecord
```
A class to represent a record (line) from an Extended Illumina Manifest [Assay] entry

Field Summary
- Fields inherited from class picard.arrays.illumina.IlluminaManifestRecord
  ILLUMINA_FLAGGED_BAD_CHR

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`htsjdk.variant.variantcontext.Allele`	`getAlleleA()`
`htsjdk.variant.variantcontext.Allele`	`getAlleleB()`
`String`	`getB37Chr()`
`Integer`	`getB37Pos()`
`Build37ExtendedIlluminaManifestRecord.Flag`	`getFlag()`
`String`	`getLine()`
`htsjdk.variant.variantcontext.Allele`	`getRefAllele()`
`String`	`getRsId()`
`Boolean`	`isBad()`
`Boolean`	`isDupe()`

public htsjdk.variant.variantcontext.Allele getAlleleA()

public htsjdk.variant.variantcontext.Allele getAlleleB()

public htsjdk.variant.variantcontext.Allele getRefAllele()

public Build37ExtendedIlluminaManifestRecord.Flag getFlag()

Class Build37ExtendedIlluminaManifestRecord