ReadEndsForMarkDuplicatesWithBarcodesCodec (picard 2.24.1 API)

java.lang.Object
- picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesCodec
- - picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesWithBarcodesCodec

All Implemented Interfaces:

htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>, Cloneable
```
public class ReadEndsForMarkDuplicatesWithBarcodesCodec
extends ReadEndsForMarkDuplicatesCodec
```
Created by nhomer on 9/13/15.

Field Summary
- Fields inherited from class picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesCodec
  in, out

Constructor Summary

Constructors
Constructor Description

ReadEndsForMarkDuplicatesWithBarcodesCodec()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>`	`clone()`
`ReadEndsForMarkDuplicates`	`decode()`
`void`	`encode(ReadEndsForMarkDuplicates read)`

Methods inherited from class picard.sam.markduplicates.util.ReadEndsForMarkDuplicatesCodec
getInputStream, getOutputStream, setInputStream, setOutputStream

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - ReadEndsForMarkDuplicatesWithBarcodesCodec
```
public ReadEndsForMarkDuplicatesWithBarcodesCodec()
```
- Method Detail
  - clone
```
public htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates> clone()
```
    Specified by:
    
    clone in interface htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
    
    Overrides:
    
    clone in class ReadEndsForMarkDuplicatesCodec
  - encode
```
public void encode(ReadEndsForMarkDuplicates read)
```
    Specified by:
    
    encode in interface htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
    
    Overrides:
    
    encode in class ReadEndsForMarkDuplicatesCodec
  - decode
```
public ReadEndsForMarkDuplicates decode()
```
    Specified by:
    
    decode in interface htsjdk.samtools.util.SortingCollection.Codec<ReadEndsForMarkDuplicates>
    
    Overrides:
    
    decode in class ReadEndsForMarkDuplicatesCodec